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Home > Research and Activities > Laboratory of Toxicogenomics Informatics

Laboratory of Toxicogenomics Informatics

1. Members

Project Leader Hiroshi Yamada
Researcher Noriyuki Nakatsu
Researcher Yoshinobu Igarashi
Researcher Yuki Yamagata
Technical Assistant Seiko Ueda

2. Background and objectives

Rapid progress in basic sciences related to genomics, proteomics and metabolomics (commonly called omics technology) has lead to advances in the implementation of omics technology in drug development. Since safety is always a major concern in drug development, ongoing our research is focused on toxicogenomics technology and actively conducted to develop new safety biomarkers. The toxicogenomics database used in our research was established by a collaborative project among National Institute of Biomedical Innovation (NIBIO), National Institute of Health Sciences (NIHS) and major Japanese pharmaceutical companies. The first 5-year project (2002-2007), named the Toxicogenomics Project(TGP1), established a large-scale, high-quality and well-designed toxicogenomics database comprising approximately 150 chemicals, mainly medical drugs. The second 5-year project (2007-2012), named the Toxicogenomics Informatics Project(TGP2), identified 30 and more potential safety biomarkers related to hepatotoxicity and nephrotoxicity, and demonstrated that toxicogenomics data combined with a large-scale integrated database were useful for assessing drug safety. To date, Our project (TGIP) are adding supplemental toxicogenomics data to the database, and also developing new safety biomarkers

3. Overview of our research

Toxicogenomics represents the utilization of genetic information for toxicological investigations. Our main goals are as follows:

1) Establishment of biomarker gene lists for prediction of toxicity for drug candidates in the early stage of drug development
2) Development of new safety assessment systems
3) Clarification of toxicological mechanisms

Outline of safety biomarker development

 

Research and Activities

  • List

    NIBIO

    Coordination Office of Research Ethics
    Department of Research and Development
    Center for Rare Disease Research
    Reverse Translational Research Project
    Platform of Therapeutics for Rare Disease
    Laboratory of Rare Disease Information and Resource Library
    Laboratory of Animal Models for Human Diseases
    Center for Vaccine and Adjuvant Research
    Laboratory of Vaccine Materials
    Laboratory of Regulation of intractable Infectious Diseases
    Laboratory of Immunobiologics Evaluation
    Laboratory of Cell Vaccine
    Laboratory of Mockup Vaccine
    Center for Drug Design Research
    Laboratory of Proteomics for Drug Discovery
    Laboratory of Biopharmaceutical Research
    Laboratory of Antibody Design
    Laboratory of XNA Screening and Design
    Laboratory of Medicinal Plant Screening
    Laboratory of Pharmacokinetic Optimization
    Laboratory of Cell Network Regulation
    Laboratory of Bioimaging and Drug Discovery
    Laboratory of Advanced Biopharmaceuticals
    Laboratory of Clinical and Analytical Chemistry
    Artificial Intelligence Center for Health and Biomedical Research
    Laboratory of Bioinformatics
    Laboratory of In silico design
    AI nutrition project
    Laboratory of Toxicogenomics Informatics
    Laboratory of Proteome Research
    Laboratory of Stem Cell Regulation
    Laboratory of Hepatocyte Regulation
    Laboratory of Cell Cultures
    Section of Laboratory Equipment
    Section of Laboratory Animals
    Research Center for Medicinal Plant Resources
    Tsukuba Primate Research Center
    Laboratory of Infectious Diseases and Immunity
    Laboratory of Nuclear Transport Dynamics
    Laboratory of Gut Environmental System
    KAGAMI Project
    Laboratory of Immunosenescence

    NIHN

    Department of Nutritional Epidemiology and Shokuiku
    Section of the National Health and Nutrition Survey
    Section of Shokuiku
    Section of Dietary Guidelines
    Department of Physical Activity Research
    Section of Behavioral Physiology
    Section of Exercise Guideline
    Section of Healthy Longevity Researches
    Department of Clinical Nutrition
    Section of Nutritional Therapy
    Department of Nutrition and Metabolism
    Section of Chrononutrition
    Section of Energy Metabolism
    Department of Food Function and Labeling
    Section of Food Component Analysis
    Section of Food Safety and Function
    Section of Information Network of Health Food
    International Center for Nutrition and Information
    Section of International Nutrition Strategy
    Section of Population Health Metrics
    Section of Global Disaster Nutrition
    AI Nutrition Research team
    Section of Research Collaboration and Partnership

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